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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs117704449 chr11:49506230 C/T 5.51E-8 508 37.67 36.57 6.7 KM Plot
KIRC rs117772923 chr16:2929391 C/T 3.09E-5 504 36.12 42.2 3.37 KM Plot
KIRC rs117817503 chr21:47729335 C/A 4.76E-5 495 37.03 37.33 17.23 KM Plot
KIRC rs117864043 chr15:24361238 G/A 2.42E-8 496 37.35 33.7 3.3 KM Plot
KIRC rs117947312 chr15:24452316 G/T 1.76E-8 500 37.47 35.72 3.3 KM Plot
KIRC rs118020535 chr16:15624402 A/G 9.92E-11 499 37.5 37.03 4.45 KM Plot
KIRC rs11806175 chr1:41292969 C/T 7.03E-5 509 37.47 37.37 10.85 KM Plot
KIRC rs118062513 chr16:2956714 A/G 1.44E-5 498 37.03 37.9 9.37 KM Plot
KIRC rs118151152 chr15:24455699 G/C 1.82E-8 494 37.53 30.62 3.3 KM Plot
KIRC rs11816356 chr10:22426724 A/G 0 509 1.7 44.18 36.88 KM Plot
KIRC rs11821869 chr11:34769653 C/T 1.15E-7 498 37.75 25 3.3 KM Plot
KIRC rs1184498 chr6:25864882 G/C 7.36E-5 494 38.83 29.38 6.8 KM Plot
KIRC rs11881066 chr19:10956989 C/T 4.48E-5 496 35.92 49 11.47 KM Plot
KIRC rs11904641 chr2:109501567 A/C 6.77E-12 509 37.73 26.43 2.3 KM Plot
KIRC rs12219175 chr10:33012164 C/A 3.62E-6 505 37.37 37.53 7.33 KM Plot